Soybean go annotation
WebYour initial question did not contain much detail; the only thing that became clear was that you have RNA-seq data from a experiment with soy beans, and that you would like to … Web25. máj 2024 · Annotating gene structures and functions to genome assemblies is necessary to make assembly resources useful for biological inference. Gene Ontology (GO) term assignment is the most used functional annotation system, and new methods for GO assignment have improved the quality of GO-based function predictions. The Gene …
Soybean go annotation
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Web19. nov 2012 · The availability of complete genome sequence of soybean has allowed research community to design the 66 K Affymetrix Soybean Array GeneChip for genome-wide expression profiling of soybean. In this study, we carried out microarray analysis of leaf tissues of soybean plants, which were subjected to drought stress from late vegetative V6 … Webpannzer2. PANNZER (Protein ANNotation with Z-scoRE) is a fully automated service for functional annotation of prokaryotic and eukaryotic proteins of unknown function. The …
Web6. feb 2024 · The location information of each soybean C2H2-ZF gene on chromosome was determined from the soybean genome annotation file … Web21. nov 2013 · Out of these 15,368 genes, 13,973 genes each expressed a single isoform exhibiting statistically significant ( p < 0.05) changes in their transcript levels in at least …
Web1. Glycine_max_v4.0 Organism: Glycine max (soybean) Submitter: US DOE Joint Genome Institute (JGI-PGF) Date: 2024/03/10 Assembly type: Assembly level: Chromosome Genome representation: full RefSeq category: representative genome GenBank assembly accession: GCA_000004515.5 (latest) RefSeq assembly accession: GCF_000004515.6 (latest) IDs: … Web10. sep 2014 · In the present study, a genome-wide annotation of the soybean WRKY family was carried out and members involved in the response to P. pachyrhizi were identified. Results: As a result of a soybean genomic databases search, 182 WRKY-encoding genes were annotated and 33 putative pseudogenes identified. Genes involved in the response …
WebStructural variation analysis in soybean using Oxford Nanopore and Illumina sequencing data - soybean_sv_paper/go_analysis.R at master · malemay/soybean_sv_paper
WebAnnotation package for FANTOM4 promoters identified from THP-1 cells: FDb.InfiniumMethylation.hg18: Tim Triche, Jr. Annotation package for Illumina Infinium … external studies meaninghttp://ekhidna2.biocenter.helsinki.fi/sanspanz/ external stud wall insulationWeb6. okt 2024 · Functional elements play essential roles in regulating gene expression in living cells and tissues 1.There have been great efforts to identify and annotate functional elements in human and mouse ... external stud wallWebAbout the SFGD (Soybean Functional Genomics Database) Soybean (Glycine max L.) is a globally important leguminous crop producing high-quality protein and oil.Following the … external stye treatmentWeb1. aug 2008 · A clickable GO tree that illustrates the hierarchy structure of the ontology is available to select a GO term for searching the associated IDs and annotation for the … external styeWeb1. apr 2024 · Download Annotations for 2024-03-06 release Overview The gene association files ingested from GO Consortium members are shown in the table below. Files are in the GO annotation file format and are compressed using the UNIX gzip utility. Please see the upstream resource information for further details on the annotation set. external style sheet for cytoscape angularWebSoybeanGDB is a comprehensive database providing informatics service to researchers focused on the genetic and genomic studies of soybean. A total of 39 high-quality … external structures of the human eye